Information for 13-TCTGTCTTCW (Motif 20)

A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T
Reverse Opposite:
C G T A A C T G C G T A C G T A A C T G C G T A T G A C C T G A A C T G C T G A
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.782
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif11.69%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif2.03%
Average Position of motif in Targets55.4 +/- 21.9bp
Average Position of motif in Background50.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTGTCTTCW
YCTTTGTTCC
 A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTGTCTTCW---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTGTCTTCW---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCTGTCTTCW
----GCTTCC
 A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTGTCTTCW-------
-CCGTCTTCCCCCTCAC
 A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTGTCTTCW---
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTGTCTTCW
-CTGTCTGG-
 A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTGTCTTCW
VBSYGTCTGG-
 A C G T A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCTGTCTTCW
GGTCTGGCAT--
 A C G T A C G T A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTGTCTTCW
TCCTGTTTACA
 A C G T A G C T A G T C A G C T A C T G A C G T G T A C A C G T A C G T G T A C G C A T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A