Information for 8-GAGCAGTTTAGAA (Motif 19)

A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A
Reverse Opposite:
A G C T A C G T G T A C A G C T C G T A C T G A C T G A A G T C G C A T A C T G A G T C A C G T A G T C
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets59.0 +/- 24.2bp
Average Position of motif in Background32.6 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGCAGTTTAGAA
BRRCVGTTDN---
 A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGCAGTTTAGAA
GAACGTTCTAGAA
 A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGTTTAGAA--
ACAAGCAATTAATGAAT
 A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGTTTAGAA--
ACAAGCAATTAATGAAT
 A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGCAGTTTAGAA
GAANGTTCTAGAA
 A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCAGTTTAGAA
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAGCAGTTTAGAA
--ANAGATAAGAA
 A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A
A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Hmx3/MA0898.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGTTTAGAA--
ACAAGCAATTAAAGAAT
 A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGTTTAGAA--
ACAAGCAATTAAAGAAT
 A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

HSF4/MA0771.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGCAGTTTAGAA
GAANNTTCTAGAA
 A C T G C G T A C T A G G T A C C G T A A C T G A G C T A G C T C G A T C T G A A C T G C G T A T C G A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A