Information for 5-GGCACCYCTCTCY (Motif 16)

A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T
Reverse Opposite:
C T G A A T C G C G T A A C T G G C T A A C T G C T G A A C T G A T C G C G A T A T C G A T G C T G A C
p-value:1e-9
log p-value:-2.154e+01
Information Content per bp:1.766
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif6.49%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets53.3 +/- 24.8bp
Average Position of motif in Background50.1 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCACCYCTCTCY
NNGCACCTTTCTCC
 A C G T A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCACCYCTCTCY-------
GCCTCCTCCMTCWGACTGKS
 A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCACCYCTCTCY
TGACACCT------
 A C G T A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGCACCYCTCTCY
NNGGCGACACCTCNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCACCYCTCTCY-
GACCCCCCGCTGTG
 A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCACCYCTCTCY---
CTATCCCCGCCCTATT
 A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T A C G T A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCACCYCTCTCY--
GACCCCCCGCTGCGC
 A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGCACCYCTCTCY
---GCCCCGCCCC
 A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCACCYCTCTCY
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCACCYCTCTCY
-GCTCCGCCCMCY
 A C T G T A C G A T G C C G T A A T G C A G T C A G C T A G T C C A G T A G T C A C G T A T G C A G C T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T