Information for 15-CATRGGGCAA (Motif 44)

A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A
Reverse Opposite:
C G A T A C G T A T C G G A T C A G T C A G T C A G C T G T C A A C G T T C A G
p-value:1e-6
log p-value:-1.534e+01
Information Content per bp:1.779
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif52.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets45.4 +/- 25.3bp
Average Position of motif in Background48.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CATRGGGCAA----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CATRGGGCAA---
CAAAGGTCAAGGG
 A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A A C G T A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATRGGGCAA
CAAAGGTCAG
 A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CATRGGGCAA----
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATRGGGCAA
-AGRGGTCA-
 A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CATRGGGCAA---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CATRGGGCAA
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CATRGGGCAA
TAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATRGGGCAA----
NNNNTTGGGCACNNCN
 A C G T A C G T A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CATRGGGCAA
-TRAGGTCA-
 A G T C C G T A A C G T C T G A A C T G A C T G C T A G T A G C G T C A G C T A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T