Information for 18-GTTVGTTAGCATG (Motif 38)

T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G
Reverse Opposite:
A G T C C G T A A G C T T C A G A T G C C G A T C G T A C G T A T A G C A T G C C G T A C T G A A T G C
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.722
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif32.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.3 +/- 25.9bp
Average Position of motif in Background47.0 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTVGTTAGCATG
-BTVATTWGCATA
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTVGTTAGCATG
-CTCATTTGCATW
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU3F2/MA0787.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTVGTTAGCATG-
--TAATTTGCATAA
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G A C G T
A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTVGTTAGCATG--
NGTAGGTTGGCATNNN
 A C G T T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTTVGTTAGCATG---
TNTAATTTGCATANNN
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTVGTTAGCATG--
-CTAATTTGCATATT
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G A C G T A C G T
A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTTVGTTAGCATG-
--TAATTTGCATAA
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G A C G T
A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTVGTTAGCATG---
TNTAATTTGCATACNA
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTVGTTAGCATG---
TNTAATTTGCATACNA
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTTVGTTAGCATG
----ATTTGCATA
 T A C G A G C T C G A T T A C G A T C G C G A T A C G T C G T A A T C G A G T C T C G A C G A T C T A G
A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A