Information for 5-TTCGATAATC (Motif 33)

C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C G T A A C G T A G T C C T A G C G T A C G T A
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.904
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.8 +/- 17.7bp
Average Position of motif in Background53.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TTCGATAATC--
----TTAATCCG
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTCGATAATC-
---GCTAATCC
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PH0035.1_Gsc/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTCGATAATC------
AATCGTTAATCCCTTTA
 A C G T C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTCGATAATC--
----TTAATCCT
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TTCGATAATC--
----YTAATCCY
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTCGATAATC-------
--CNATAATCCGNTTNT
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTCGATAATC---
---GCTAATCCCC
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTCGATAATC---
---NYTAATCCYB
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTCGATAATC--
----TTAATCCC
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTCGATAATC-------
---NNTAATCCNGNCNN
 C G A T C G A T A G T C A C T G C G T A A C G T C G T A G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A