Information for 19-TTTACAAGTAGAAGAA (Motif 31)

C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T T A G C A C G T A C G T A T G C A G C T G T C A G T A C G A C T A C G T A C T G A G C T C G T A C G T A G C T A
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.783
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 16.5bp
Average Position of motif in Background59.2 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTACAAGTAGAAGAA
AATATACATGTAAAACA-
 A C G T A C G T C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTACAAGTAGAAGAA
AATATACATGTAAAATT-
 A C G T A C G T C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTACAAGTAGAAGAA
AATATACATGTAATATA-
 A C G T A C G T C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTACAAGTAGAAGAA
AAAATACATGTAATACT-
 A C G T A C G T C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTACAAGTAGAAGAA
TAAATACATGTAAAATT-
 A C G T A C G T C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTTACAAGTAGAAGAA
AAAATACATGTAAAAAT-
 A C G T A C G T C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTTACAAGTAGAAGAA---
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTTACAAGTAGAAGAA---
-----NTTNAGAACAATTA
 C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTTACAAGTAGAAGAA------
------TTTAGAACAATAAAAT
 C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTTACAAGTAGAAGAA------
------TTAAGAACAATAAATT
 C A G T A C G T C G A T C T G A A G T C C G T A C G T A A C T G A C G T C T G A A T C G C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T