p-value: | 1e-10 |
log p-value: | -2.512e+01 |
Information Content per bp: | 1.683 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.92% |
Number of Background Sequences with motif | 6.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 37.6 +/- 21.8bp |
Average Position of motif in Background | 59.0 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG -TRAGGTCA------- |
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FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG- ---AGGTCANTGACCTN |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTCAGGTCAGTGACAG --CAGGTGAGG----- |
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RORA/MA0071.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTCAGGTCAGTGACAG ATCAAGGTCA------- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG ---AGGTCA------- |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG --CAGGTAAGTAT--- |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG ---AGGTCAAGGTCA- |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG ---AGGTCAAGGTCA- |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG----- ---RGGTCADNNAGAGGTCAV |
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RARA::RXRA/MA0159.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCAGGTCAGTGACAG---- ---AGGTCACGGAGAGGTCA |
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