Information for 1-KGAGAGCATG (Motif 16)

C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G
Reverse Opposite:
A G T C G T C A C G A T C T A G A T G C A G C T A G T C C G A T T G A C G T C A
p-value:1e-11
log p-value:-2.724e+01
Information Content per bp:1.680
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif7.06%
Number of Background Sequences with motif1122.8
Percentage of Background Sequences with motif2.32%
Average Position of motif in Targets55.8 +/- 23.4bp
Average Position of motif in Background49.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-KGAGAGCATG----
CTCACACAATGGCGC
 A C G T C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KGAGAGCATG---
GAGCACAGCAGGACA
 A C G T A C G T C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KGAGAGCATG
ACTGAAACCA--
 A C G T A C G T C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KGAGAGCATG--
--RAACAATGGN
 C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T A C G T
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:KGAGAGCATG--
---GACAATGNN
 C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KGAGAGCATG-
-AAAACAATGG
 C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:KGAGAGCATG-
-VRAACAATGG
 C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-KGAGAGCATG--
ATGACATCATCNN
 A C G T C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--KGAGAGCATG---
CCACACAGCAGGAGA
 A C G T A C G T C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KGAGAGCATG-------
AATATACATGTAAAATT
 C A G T A C T G C G T A T C A G C T G A T A C G G A T C C G T A A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T