Information for 4-ABCVTGCBHDBGTACA (Motif 7)

C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T C T G A A G T C T A G C G C T A C G T A T A C G C T A G A T G C C G T A A C T G A C T G T A C G C G A T
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.670
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif17.39%
Number of Background Sequences with motif43.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets38.2 +/- 27.7bp
Average Position of motif in Background49.2 +/- 50.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.52
Offset:7
Orientation:forward strand
Alignment:ABCVTGCBHDBGTACA-
-------CCAGGAACAG
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ABCVTGCBHDBGTACA
-ACATGCCCGGGCAT-
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ABCVTGCBHDBGTACA
TTGCGTGCVA-------
 A C G T C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:ABCVTGCBHDBGTACA--
-------NTTGATACATT
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:ABCVTGCBHDBGTACA----
----TGCCAAAATAAACANN
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.48
Offset:3
Orientation:forward strand
Alignment:ABCVTGCBHDBGTACA----
---NNNVCTGWGYAAACASN
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.47
Offset:11
Orientation:forward strand
Alignment:ABCVTGCBHDBGTACA--
-----------GTAAACA
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.47
Offset:6
Orientation:forward strand
Alignment:ABCVTGCBHDBGTACA----
------CAAACGTAAACAAT
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.46
Offset:7
Orientation:forward strand
Alignment:ABCVTGCBHDBGTACA--
-------GCTCGTAAAAA
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.46
Offset:11
Orientation:forward strand
Alignment:ABCVTGCBHDBGTACA--
-----------GTAAACA
 C G T A A G T C A G T C T A G C A C G T A T C G A G T C A G T C G A C T C A G T A C T G C T A G A G C T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A