Information for 23-GAGTGAACGACAACAA (Motif 36)

A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGTGAACGACAACAA--
---CAAACAACAACACCT
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGTGAACGACAACAA--
--ATTTACGACAAATAGC
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GAGTGAACGACAACAA---
----ATGTCACAACAACAC
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGTGAACGACAACAA
--BTGABTGACAGS--
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GAGTGAACGACAACAA
--NTGATTGACAGN--
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GAGTGAACGACAACAA---
---------RNAACAATGG
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAGTGAACGACAACAA---
-----NTTNAGAACAATTA
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:GAGTGAACGACAACAA-
-----------AACAAT
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGTGAACGACAACAA----
---AAAATGTAAACAAACAG
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGTGAACGACAACAA----
---AAAATGTAAACAAACAG
 A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A C T G C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G