Information for 22-AAGTGTATGCACACTC (Motif 35)

C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C G T A C G T
p-value:1e-3
log p-value:-7.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGTGTATGCACACTC-
NNGTATGTGCACATNNN
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGTGTATGCACACTC
CCATTGTATGCAAAT--
 A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGTGTATGCACACTC-
NTNTATGTGCACATNNN
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGTGTATGCACACTC--
-NSTGTTTRCWCAGBNNN
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGTGTATGCACACTC---
---NNTTTGCACACGGCCC
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAGTGTATGCACACTC----
----AGCGGCACACACGCAA
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAGTGTATGCACACTC--
--TTGTATGCAAATTAGA
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAGTGTATGCACACTC--
--TTGTATGCAAATTAGA
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGTGTATGCACACTC--
--TTGTATGCAAATTAGA
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAGTGTATGCACACTC
--GHATATKCAT----
 C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T