Information for 20-CAYATGTNACAGRTGW (Motif 34)

A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A
Reverse Opposite:
C G A T A T G C C G T A A G T C T A G C A C G T T A C G A C G T A C T G C G T A G A T C C G T A A G C T C T G A A G C T A T C G
p-value:1e-3
log p-value:-7.274e+00
Information Content per bp:1.736
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CAYATGTNACAGRTGW-
-------NACATATGGN
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

FIGLA/MA0820.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CAYATGTNACAGRTGW-
-------AACAGGTGNT
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

CLOCK/MA0819.1/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CAYATGTNACAGRTGW-
-------AACACGTGTT
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CAYATGTNACAGRTGW--
------TGACAGGTGTCA
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CAYATGTNACAGRTGW-
-------GACAGGTGTN
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAYATGTNACAGRTGW
YTAATTRAWWCCAGATGT
 A C G T A C G T A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CAYATGTNACAGRTGW--
------TGACAGGTGTCA
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CAYATGTNACAGRTGW-
-------NNCAGGTGTN
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

TGIF2/MA0797.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CAYATGTNACAGRTGW--
------TGACAGCTGTCA
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CAYATGTNACAGRTGW
-------AACAGGTGT
 A T G C C T G A A G C T T C G A A C G T C T A G C G A T A G T C C G T A A T G C C G T A A T C G C T A G A C G T A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T