Information for 5-GGCAGAGGCT (Motif 8)

C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T
Reverse Opposite:
T G C A A C T G G A T C A G T C A C G T G T A C C G A T A C T G A T G C A G T C
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.835
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.77%
Number of Background Sequences with motif384.1
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets47.7 +/- 25.2bp
Average Position of motif in Background51.0 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGAGGCT
TGCCTGAGGCN
 A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCAGAGGCT
AGCCTCAGGCA
 A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGAGGCT
NGCCTGAGGCN
 A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCAGAGGCT-
TAGGGCAAAGGTCA
 A C G T A C G T A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGAGGCT--
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGCAGAGGCT--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAGGCT-
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-11
Orientation:forward strand
Alignment:-----------GGCAGAGGCT
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGAGGCT-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGCAGAGGCT-
------NGCTN
 C T A G A T C G G T A C C G T A C A T G G T C A A C T G C T A G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G