Information for 3-AGTGACTCAT (Motif 2)

C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T
Reverse Opposite:
T C G A G A C T A C T G T G C A T A C G A C G T T G A C G T C A G A T C G C A T
p-value:1e-20
log p-value:-4.829e+01
Information Content per bp:1.724
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif7.91%
Number of Background Sequences with motif911.2
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets55.3 +/- 26.7bp
Average Position of motif in Background50.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUND/MA0491.1/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:AGTGACTCAT-
GGTGACTCATC
 C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T A C G T
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

FOS/MA0476.1/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGTGACTCAT-
TGTGACTCATT
 C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

FOSL1/MA0477.1/Jaspar

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGTGACTCAT-
GGTGACTCATG
 C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T A C G T
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.93
Offset:1
Orientation:forward strand
Alignment:AGTGACTCAT-
-ATGACTCATC
 C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T A C G T
A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-AGTGACTCAT
GGATGACTCAT
 A C G T C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:6
Score:0.93
Offset:0
Orientation:forward strand
Alignment:AGTGACTCAT--
DATGASTCATHN
 C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T A C G T A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:7
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-AGTGACTCAT-
GGATGACTCATC
 A C G T C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AGTGACTCAT
DATGASTCAT
 C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AGTGACTCAT
RATGASTCAT
 C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-AGTGACTCAT-
NNVTGASTCATN
 A C G T C G T A C T A G A C G T A C T G C G T A A T G C A C G T A G T C C T G A A G C T A C G T
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C