Information for 9-GGCCAAGGTC (Motif 16)

C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C
Reverse Opposite:
A C T G T G C A A G T C G T A C A C G T A G C T A C T G A T C G A G T C G T A C
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif154.5
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets71.4 +/- 17.8bp
Average Position of motif in Background49.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGCCAAGGTC-
-BTCAAGGTCA
 C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGCCAAGGTC-
-NTCAAGGTCA
 C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGGTC-
AGGTCAAGGTCA
 A C G T C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGGTC-
AGGTCAAGGTCA
 A C G T C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GGCCAAGGTC--
--TCAAGGTCAN
 C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T A C G T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGGTC------
TATTCAAGGTCATGCGA
 A C G T C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGCCAAGGTC--
--TCAAGGTCAT
 C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGCCAAGGTC--
--CAAAGGTCAG
 C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGGTC---
AAGTTCAAGGTCAGC
 A C G T A C G T C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGCCAAGGTC---
---CAAGGHCANV
 C A T G A C T G A T G C G T A C T C G A T G C A C A T G T C A G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G