Information for 8-ACAGCAGCAA (Motif 15)

C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A
Reverse Opposite:
C G A T C G A T C T A G A G T C C G A T A C T G T G A C A C G T C T A G G C A T
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.781
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif246.3
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets61.0 +/- 24.8bp
Average Position of motif in Background48.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAA--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAA--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCAA-
CACAGCAGGGGG
 A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAGCAA
CACAGN-----
 A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCAGCAA
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCAGCAA
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCAGCAA
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAA-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCAA
AACAGCTGCAG
 A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAA-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G G T A C C G T A T C A G G A T C C G T A C G T A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A