Information for 10-CGCCTGCCTTGCA (Motif 8)

A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C T C G A C G T A A C T G A C T G G T A C C G T A A C T G A C T G A G T C A C T G
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.4 +/- 16.6bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGCCTTGCA
NNACTTGCCTT---
 A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCCTTGCA
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCCTTGCA
NNCACCTGNN-----
 A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGCCTGCCTTGCA---
---CTGTCTGTCACCT
 A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCCTTGCA
TACACCTGTC-----
 A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGCCTTGCA
NCACCTGTN-----
 A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCCTTGCA
CGCACCTGCT-----
 A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGCCTTGCA
CCCCCTGCTGTG--
 A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCCTTGCA
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCCTTGCA
AACACCTGCT-----
 A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C G T A C T G A G T C C G T A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T