Information for 8-TCGACTCTGA (Motif 34)

C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G C T G A A C T G A C G T A G T C A C T G C G T A
p-value:1e-3
log p-value:-7.910e+00
Information Content per bp:1.945
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.6 +/- 27.8bp
Average Position of motif in Background56.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCGACTCTGA----
ATTGGACTTTGACCCC
 A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCGACTCTGA--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGACTCTGA------
TGGACTTTGNNCTNTG
 C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGACTCTGA-----
TGGACTTTGNNCTCN
 C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCGACTCTGA
NATGACCTTGA
 A C G T C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCGACTCTGA-
ATGACCTTGAA
 C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TCGACTCTGA---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

POL002.1_INR/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCGACTCTGA
--NNNANTGA
 C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCGACTCTGA
CAAAATCGAAACTAA
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCGACTCTGA---
-TGACCTTGACCT
 C G A T A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C T G C G T A A C G T A C G T A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T