Information for 6-AACCCHCTAC (Motif 28)

T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C
Reverse Opposite:
A T C G C G A T C G T A C T A G C T A G C A T G C A T G T A C G C G A T A C G T
p-value:1e-7
log p-value:-1.641e+01
Information Content per bp:1.529
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif631.2
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets50.5 +/- 22.4bp
Average Position of motif in Background48.9 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3/MA0737.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACCCHCTAC----
GACCCCCCACGAAG
 T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C A C G T A C G T A C G T A C G T
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AACCCHCTAC-
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GLIS1/MA0735.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AACCCHCTAC-----
AGACCCCCCACGAAGC
 A C G T T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACCCHCTAC
AAACCGCAA-
 T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACCCHCTAC
AAACCACANN
 T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACCCHCTAC
SSAATCCACANN
 A C G T A C G T T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AACCCHCTAC--
TATCGACCCCCCACAG
 A C G T A C G T A C G T A C G T T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AACCCHCTAC---
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T A C G T T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACCCHCTAC
AAACCGCAAA
 T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AACCCHCTAC
TCCAATCCACA--
 A C G T A C G T A C G T T G C A G C T A A T G C G T A C G T A C G A T C G A T C G C A T G C T A A T G C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T