Information for 19-MWGRGAATWAAGG (Motif 22)

G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T G C T A C G T A A C G T A C G T A G T C A G C T A G T C C G A T A C G T
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets31.8 +/- 19.1bp
Average Position of motif in Background50.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:MWGRGAATWAAGG
---GGAACAAAGR
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:MWGRGAATWAAGG----
AGAAGAACAAAGGACTA
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:MWGRGAATWAAGG
---AAAACAAAGG
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MWGRGAATWAAGG----
ATAAGAACAAAGGACTA
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

LMX1B/MA0703.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:MWGRGAATWAAGG
---TTAATTAA--
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:MWGRGAATWAAGG
--GGTAATTAAA-
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:MWGRGAATWAAGG
--GNGGATTAGN-
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:MWGRGAATWAAGG
-----AACAAAGG
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:MWGRGAATWAAGG-
----GAACAATGGN
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

PRRX1/MA0716.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:MWGRGAATWAAGG
---CTAATTAA--
 G T C A C G T A A C T G C T G A C T A G C G T A C G T A C G A T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T