Information for 17-CRMMSTCAGCCCAGCS (Motif 20)

T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C
Reverse Opposite:
T A C G A C T G A G T C A G C T C T A G A C T G T A C G T A G C A C G T A C T G T C G A A T C G A C G T A C G T G A C T A T C G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.715
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets29.4 +/- 26.2bp
Average Position of motif in Background54.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CRMMSTCAGCCCAGCS
----ATCACCCCAT--
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CRMMSTCAGCCCAGCS
----ATCACCCCAC--
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C
A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:CRMMSTCAGCCCAGCS-
-------TGCCCAGNHW
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CRMMSTCAGCCCAGCS
--CNGTCACGCCAC--
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C
A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CRMMSTCAGCCCAGCS
----ATCACCCCAT--
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CRMMSTCAGCCCAGCS--
---TCCCAGMCRAGCCCC
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CRMMSTCAGCCCAGCS--
-NNNTCCATCCCATAANN
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C A C G T A C G T
A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:11
Orientation:forward strand
Alignment:CRMMSTCAGCCCAGCS
-----------CAGCC
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PAX5/MA0014.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CRMMSTCAGCCCAGCS----
-GAGGGCAGCCAAGCGTGAC
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C A C G T A C G T A C G T A C G T
A C G T T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CRMMSTCAGCCCAGCS-----
-----GCAGCCAAGCGTGACN
 T A G C C T G A T G A C T G A C T A G C A G C T A G T C C G T A A C T G A T G C A G T C A G T C C T G A A C T G T G A C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C