Information for 16-CCAAGCCTGAAGCCTV (Motif 18)

A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
Reverse Opposite:
A G T C G T C A A T C G C A T G G T A C A C G T A G C T A T G C C G T A C T A G C T A G A G T C A G C T A C G T A T C G A C T G
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.787
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.5 +/- 14.1bp
Average Position of motif in Background57.2 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAAGCCTGAAGCCTV
---AGCCTCAGGCA--
 A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAAGCCTGAAGCCTV
---CGCCTCAGGCA--
 A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAAGCCTGAAGCCTV
CNAGGCCT--------
 A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAAGCCTGAAGCCTV
---TGCCTGAGGCN--
 A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAAGCCTGAAGCCTV
-CAAGCTT--------
 A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAAGCCTGAAGCCTV
CTAGGCCT--------
 A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCAAGCCTGAAGCCTV
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCAAGCCTGAAGCCTV
GCAGCCAAGCGTGACN----
 A C G T A C G T A C G T A C G T A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCAAGCCTGAAGCCTV
-ATTGCCTGAGGCAAT
 A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Pax6/MA0069.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCAAGCCTGAAGCCTV
AANTCATGCGTGAA-----
 A C G T A C G T A C G T A G T C A T G C C G T A C T G A A C T G A G T C A G T C A C G T A T C G C T G A G T C A A C T G G T A C A T G C A C G T T A C G
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T