Information for 23-TGGCTAAGGTCTA (Motif 41)

A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A G T C A G T C A C G T A C G T C G T A A C T G A G T C A G T C C G T A
p-value:1e-3
log p-value:-7.764e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGGCTAAGGTCTA
NNCGTTGCTATGGNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------TGGCTAAGGTCTA--
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGGCTAAGGTCTA
TAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTAAGGTCTA
TGGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGGCTAAGGTCTA---
---CAAAGGTCAAGGG
 A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGGCTAAGGTCTA-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGGCTAAGGTCTA
---TCAAGGTCAT
 A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGCTAAGGTCTA----
-GGCAAAAGTCCAATAA
 A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGGCTAAGGTCTA
---TCAAGGTCAN
 A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGCTAAGGTCTA
CCGCCCAAGGGCAG
 A C G T A C G T A C T G A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C G T C G T A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G