Information for 7-AGTCAATAGA (Motif 34)

C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C G T A C G T A C T G C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.764e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background42.5 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGTCAATAGA
AAAAGTCAA----
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAATAGA
WAAGTAAAYA--
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGTCAATAGA-
NCWRWGTAAACANSV
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTCAATAGA
HNRAATCAAT---
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAATAGA
TATGTAAACANG
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

ONECUT3/MA0757.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGTCAATAGA
AAAAAATCAATAAT
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGTCAATAGA
NCTAAGTAAACA--
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGTCAATAGA
TATGTAAATAT-
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGTCAATAGA
TATGTAAATAT-
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGTCAATAGA-
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T