Information for 4-TAGGACCTCG (Motif 32)

A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-7.764e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAGGACCTCG-
NATGACCTTGA
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAGGACCTCG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGGACCTCG--
-ATGACCTTGAA
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C G T A C G T
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAGGACCTCG--
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGACCTCG
--TGACCT--
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGGACCTCG-
-ATGACCTTGA
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGACCTCG
--TGACCYCT
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGACCTCG--
--TGACCTTGAT
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGGACCTCG-
-NTGACCTTGA
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGGACCTCG
--TGACCTYA
 A C G T C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C T G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A