Information for 1-TACATTMACAYRM (Motif 3)

A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
Reverse Opposite:
A C G T A G T C C T A G A C G T A C T G A C G T A C T G C T G A C G T A A C G T A C T G A C G T C G T A
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.870
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 18.0bp
Average Position of motif in Background58.5 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TACATTMACAYRM-
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TACATTMACAYRM
NNCATTCATTCATNNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TACATTMACAYRM
CTCATTTGCATW-
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TACATTMACAYRM
BTVATTWGCATA-
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TACATTMACAYRM
-TAATTTGCATAA
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TACATTMACAYRM--
-ACATTCATGACACG
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TACATTMACAYRM
-TAATTTGCATAA
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TACATTMACAYRM-
-AAATTAGCATAAT
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A A C G T
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TACATTMACAYRM
-ATATTTACATA-
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACATTMACAYRM
---ATTTGCATA-
 A C G T C G T A A G T C C G T A C G A T A G C T G T A C C G T A A G T C C G T A A G T C C T A G G T C A
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T