Information for 18-ATSYRWGKKRKSW (Motif 27)

G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
Reverse Opposite:
C G A T A T C G G T A C A G T C G T A C G T C A A G T C C G T A A G C T C T G A A T C G C G T A A C G T
p-value:1e-4
log p-value:-9.897e+00
Information Content per bp:1.718
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.00%
Number of Background Sequences with motif169.7
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets52.0 +/- 29.1bp
Average Position of motif in Background50.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATSYRWGKKRKSW
-TGTCAGGGGGCG
 G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ATSYRWGKKRKSW
NTTNTATGAATGTGNNC-
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ATSYRWGKKRKSW
TATGCGGGTA----
 A C G T G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----ATSYRWGKKRKSW
NANAGATCAAAGGGNNN-
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ATSYRWGKKRKSW
-TGCGTGGGYG--
 G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----ATSYRWGKKRKSW
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ATSYRWGKKRKSW
AATTAGTG------
 A C G T G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----ATSYRWGKKRKSW
NNNGTAACTANGNNA---
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:ATSYRWGKKRKSW-
----ATGGGGTGAT
 G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----ATSYRWGKKRKSW
AAAGATCAAAGGGTT--
 A C G T A C G T A C G T A C G T G T C A A C G T A T G C A G C T C T G A C G A T A C T G A C G T A C T G C T A G A C T G A T G C C G T A
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T A C G T