Information for 13-TTYWSATTSAGATWKW (Motif 19)

A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
Reverse Opposite:
C G T A G T C A C G T A C G T A A C G T A T G C A C G T T A C G C G T A C G T A A C G T A T C G C G A T C T G A C G T A C G T A
p-value:1e-6
log p-value:-1.408e+01
Information Content per bp:1.827
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.0 +/- 7.5bp
Average Position of motif in Background36.7 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTYWSATTSAGATWKW
CTTTGTTATGCAAAT---
 A C G T A C G T A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTYWSATTSAGATWKW
CATTGTTATGCAAAT---
 A C G T A C G T A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTYWSATTSAGATWKW
GACCACATTCATACAAT
 A C G T A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTYWSATTSAGATWKW
--CTCATTTGCATW--
 A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTYWSATTSAGATWKW
NNCATTCATTCATNNN--
 A C G T A C G T A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTYWSATTSAGATWKW
----NATTCAAAT---
 A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTYWSATTSAGATWKW
--CTAATTTGCATATT
 A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTYWSATTSAGATWKW
-NWTGATTRGRTTAWN
 A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
A C G T C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTYWSATTSAGATWKW
---ATATTTACATA--
 A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTYWSATTSAGATWKW
--BTVATTWGCATA--
 A C G T A C G T A G C T C G T A A T G C C G T A A C G T A C G T A T C G C G T A A T C G C G T A A C G T C G A T A C G T C G A T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T