Information for 7-AAHVCHCTACAGC (Motif 16)

C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G G T A C A C G T A C T G A C G T C T G A A C T G C G T A C T A G A C G T C A T G A C G T A C G T
p-value:1e-6
log p-value:-1.597e+01
Information Content per bp:1.786
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.00%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.7 +/- 8.7bp
Average Position of motif in Background39.5 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAHVCHCTACAGC-----
-TCNCTTTACAGCGNNNT
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAHVCHCTACAGC-----
-TCNNTTTACAGCGNNNT
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAHVCHCTACAGC-----
-TCNNTTTACAGCGNNNT
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AAHVCHCTACAGC
-------CACAGN
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:AAHVCHCTACAGC-
---------CAGCC
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAHVCHCTACAGC---
YTAATTRAWWCCAGATGT
 A C G T A C G T C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AAHVCHCTACAGC-----
--------ACAGCTGTTV
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AAHVCHCTACAGC-----
--------HCAGCTGDTN
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AAHVCHCTACAGC--
-------AACAGCTG
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:AAHVCHCTACAGC-----
--------NCAGCTGCTG
 C G T A C G T A G A T C T C G A A G T C G A C T G T A C A G C T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G