Information for 6-AMRGTTTSSAARC (Motif 14)

C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T A C G T A T C G A T C G C G T A C G T A C G T A A G T C A G C T A C G T A C G T
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.850
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 41.5bp
Average Position of motif in Background15.4 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AMRGTTTSSAARC
-CGGTTTCAAA--
 C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AMRGTTTSSAARC-
TNTGGTTTCGATACN
 A C G T C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AMRGTTTSSAARC
NNNNTAACGGTTNNNAN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T A C G T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AMRGTTTSSAARC
NNANTAACGGTTNNNAN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AMRGTTTSSAARC--
-CAGTTTCGNTTCTN
 C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C A C G T A C G T
A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AMRGTTTSSAARC
-TGGTTTCAGT--
 C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AMRGTTTSSAARC
--ATTTTCCATT-
 C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AMRGTTTSSAARC
BRRCVGTTDN-----
 A C G T A C G T C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AMRGTTTSSAARC--
NTGGTTTCGGTTNNN
 C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AMRGTTTSSAARC
TGTCGGTT-------
 A C G T A C G T C G T A G T C A T C A G A C T G A C G T A C G T A C G T A T G C A T G C C G T A C G T A C T G A A G T C
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T