p-value: | 1e-8 |
log p-value: | -1.905e+01 |
Information Content per bp: | 1.903 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 3.90% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 44.2 +/- 24.3bp |
Average Position of motif in Background | 48.5 +/- 10.1bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTGACTAGTT --TGACCTYA------ |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTGACCTGACTAGTT CCTCACCTG------- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTGACTAGTT --TGACCT-------- |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACCTGACTAGTT NNNNTGACCCGGCGCG-- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACCTGACTAGTT NNCNTGACCCCGCTCT-- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTGACTAGTT --TGACCTARTT---- |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACCTGACTAGTT NNACTTACCTN------- |
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RORA/MA0071.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTGACTAGTT --TGACCTTGAT---- |
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PH0058.1_Hoxb3/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTGACCTGACTAGTT--- --TGAGCTAATTAGTTGGA |
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CRE(bZIP)/Promoter/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTGACCTGACTAGTT CGGTGACGTCAC----- |
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