Information for 2-CAAHGCAAVATCCTGC (Motif 5)

A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
Reverse Opposite:
A C T G A G T C C T G A C T A G C T A G C G T A C G A T A G T C A G C T A G C T A C T G A G T C C G T A A C G T A C G T T A C G
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.757
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.7 +/- 19.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAHGCAAVATCCTGC---
NTNATGCAAYMNNHTGMAAY
 A C G T A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C A C G T A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAAHGCAAVATCCTGC
----ACCACATCCTGT
 A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAAHGCAAVATCCTGC
ATATCAAAACAAAACA----
 A C G T A C G T A C G T A C G T A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CAAHGCAAVATCCTGC-
-------ACATCCTGNT
 A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAAHGCAAVATCCTGC
CAAACAACAACACCT---
 A C G T A C G T A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAAHGCAAVATCCTGC
-AAACAAACATTC---
 A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAAHGCAAVATCCTGC
AAACCGCAAA-------
 A C G T A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAAHGCAAVATCCTGC
AAACCGCAA--------
 A C G T A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAAHGCAAVATCCTGC
-AAGGCAAGTGT----
 A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CAAHGCAAVATCCTGC
CAATTGCAAAAATAT--
 A C G T A T G C C G T A G T C A G C A T C T A G A G T C C T G A C T G A T A C G C G T A C G A T A G T C A G T C A G C T A C T G A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T