Information for 1-CWCACYTTKWMYT (Motif 2)

A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T C G A T G T A C C G T A C G T A C T A G A C T G A C G T A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.831
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.62%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets73.4 +/- 12.1bp
Average Position of motif in Background46.7 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CWCACYTTKWMYT
TTCACACCTT-----
 A C G T A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CWCACYTTKWMYT
NTTTTCACACCTT-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CWCACYTTKWMYT
TCACACCT------
 A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CWCACYTTKWMYT
TCACACCT------
 A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CWCACYTTKWMYT
TCACACCT------
 A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CWCACYTTKWMYT
TCACACCT------
 A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CWCACYTTKWMYT
TCACACCT------
 A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CWCACYTTKWMYT
-TGACCTTGACCT
 A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CWCACYTTKWMYT
TTTCACACCTN-----
 A C G T A C G T A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CWCACYTTKWMYT
NNACTTACCTN-----
 A C G T A C G T A C G T A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C T G C G T A G T C A A G C T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T