Information for 11-CAATATGACCTAGGTA (Motif 24)

A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C T G
p-value:1e-4
log p-value:-9.578e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CAATATGACCTAGGTA--
----TTGACCTANTTATN
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CAATATGACCTAGGTA
-----TGACCTARTT-
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CAATATGACCTAGGTA
-----TGACCTTGAT-
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAATATGACCTAGGTA
---NATGACCTTGA--
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAATATGACCTAGGTA
AGGNCANNGTGACCT-----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAATATGACCTAGGTA
-----TGACCT-----
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAATATGACCTAGGTA
----ATGACCTTGA--
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAATATGACCTAGGTA
----NTGACCTTGA--
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAATATGACCTAGGTA-
NNNNATGACCTTGANTN
 A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAATATGACCTAGGTA
GGTCANNGTGACCTN----
 A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T C G T A
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T