Information for 9-ADAAGAACWGAAN (Motif 13)

G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T
Reverse Opposite:
C G T A A C G T G C A T G T A C G C T A A C T G C G A T A C G T T G A C G A C T A C G T G C A T C G A T
p-value:1e-4
log p-value:-9.597e+00
Information Content per bp:1.557
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif1278.0
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets59.2 +/- 19.8bp
Average Position of motif in Background49.8 +/- 44.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ADAAGAACWGAAN
-AAATCACAGCA-
 G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ADAAGAACWGAAN
--AAGCACTTAA-
 G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ADAAGAACWGAAN-
--CGGAAGTGAAAC
 G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T A C G T
A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ADAAGAACWGAAN-
CNTTAAGTACTTAANG
 A C G T A C G T G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ADAAGAACWGAAN--
TACTAAGTACTTAAATG
 A C G T A C G T G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ADAAGAACWGAAN
-AAATCACTGC--
 G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ADAAGAACWGAAN
CAAATCACTG---
 G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ADAAGAACWGAAN--
TTTTAAGTACTTAAATT
 A C G T A C G T G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ADAAGAACWGAAN
ATATCAAAACAAAACA--
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ADAAGAACWGAAN--
---GGAAGTGAAAST
 G C T A C G T A T G C A C T G A A C T G G T C A C G T A T G A C C G A T C A T G C G T A T G C A G C A T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T