Information for 6-ATGTGCCTAAGTGCAA (Motif 7)

C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A C T A G C T A G A G T C C G T A A G T C C G T A A C G T
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.8 +/- 12.8bp
Average Position of motif in Background21.9 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:ATGTGCCTAAGTGCAA
------TTAAGTGC--
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATGTGCCTAAGTGCAA---
--NTNNTTAAGTGGTTANN
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ATGTGCCTAAGTGCAA
------TTAAGTGGN-
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATGTGCCTAAGTGCAA
------CTAATKGV--
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATGTGCCTAAGTGCAA
----GCCTCAGGGCAT
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATGTGCCTAAGTGCAA
--CCGCCCAAGGGCAG
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ATGTGCCTAAGTGCAA
------TTAAGTGGT-
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATGTGCCTAAGTGCAA
--TTGCCCTAGGGCAT
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ATGTGCCTAAGTGCAA
---TGCCCTNGGGCA-
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ATGTGCCTAAGTGCAA---
--NTNNTTAAGTGGNTNAN
 C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T G T C A C G T A A C T G A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G