Information for 3-AMACMTWGATATACAC (Motif 3)

G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C
Reverse Opposite:
A C T G C G A T A T C G C A G T C T G A A C G T C G T A G C A T A T G C G C A T G C T A A C G T C T A G G C A T A C T G C G A T
p-value:1e-11
log p-value:-2.715e+01
Information Content per bp:1.680
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.19%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 24.3bp
Average Position of motif in Background48.9 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AMACMTWGATATACAC
TACCCTAGTTACCGA-
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AMACMTWGATATACAC--
-AATNTTGATACCCTATN
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C A C G T A C G T
A C G T T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AMACMTWGATATACAC--
-GACAGAGATATCAGTGT
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AMACMTWGATATACAC-
---CAAACGTAAACAAT
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C A C G T
A C G T A C G T A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AMACMTWGATATACAC--
---CATTGTTATGCAAAT
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C A C G T A C G T
A C G T A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AMACMTWGATATACAC--
-ANNNATGATACCCCATC
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C A C G T A C G T
A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.50
Offset:10
Orientation:forward strand
Alignment:AMACMTWGATATACAC
----------ATCCAC
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AMACMTWGATATACAC
----WWATRTAAACAN
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C
A C G T A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AMACMTWGATATACAC--
---CTTTGTTATGCAAAT
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AMACMTWGATATACAC--
-ANANGTGATACCCTATN
 G C T A G T A C C G T A A G T C G T C A C G A T C G T A A T C G C G T A A C G T T G C A A G C T G T C A T A G C C G T A T G A C A C G T A C G T
A C G T T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C