Information for 11-TAACATTGAT (Motif 15)

A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C G T C A C G T A A C G T A C T G A C G T A C G T C G T A
p-value:1e-2
log p-value:-5.974e+00
Information Content per bp:1.961
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 22.9bp
Average Position of motif in Background45.6 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TAACATTGAT----
----ATTGATTYND
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TAACATTGAT--
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TAACATTGAT--
--NTATYGATCH
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAACATTGAT---
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAACATTGAT---
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAACATTGAT------
NNNNNATTGATGNGTGN
 A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

CUX1/MA0754.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TAACATTGAT--
--NTATCGATTA
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAACATTGAT
AACAATAACATTGTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAACATTGAT
NATGACCTTGA-
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TAACATTGAT--
--TTATCGATTA
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A