Information for 9-TAYAGACWCT (Motif 14)

A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T
Reverse Opposite:
C G T A C T A G C G T A A C T G A G C T T G A C C G A T T C A G A C G T C T G A
p-value:1e-3
log p-value:-7.819e+00
Information Content per bp:1.791
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif526.8
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets53.3 +/- 19.1bp
Average Position of motif in Background47.4 +/- 53.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAYAGACWCT
GGTTAGAGACCT-
 A C G T A C G T A C G T A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAYAGACWCT
-BCAGACWA-
 A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAYAGACWCT-
-CCAGACRSVB
 A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TAYAGACWCT--
AGCAACAGCCGCACC
 A C G T A C G T A C G T A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAYAGACWCT
CGTCTAGACA--
 A C G T A C G T A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAYAGACWCT
-CCAGACAG-
 A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAYAGACWCT------
TACGAGACTCCTCTAAC
 A C G T A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TAYAGACWCT-
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TAYAGACWCT---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TAYAGACWCT
ATATTTACATA
 A C G T A G C T C G T A A G T C G C T A A C T G C T G A G T A C G C A T G A T C G C A T
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A