Information for 5-CGTTTGCCCA (Motif 14)

A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A
Reverse Opposite:
A G C T T C A G C T A G A C T G T G A C G C T A G C T A G C T A G A T C T A C G
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.703
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.03%
Number of Background Sequences with motif584.6
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets46.4 +/- 26.0bp
Average Position of motif in Background49.2 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGTTTGCCCA-----
GGGTGTGCCCAAAAGG
 A C G T A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGTTTGCCCA--
---ATGCCCACC
 A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CGTTTGCCCA--
---CTGCCCGCA
 A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTGCCCA-
TGACCTTTGCCCTA
 A C G T A C G T A C G T A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGTTTGCCCA----
----TGCCCAGNHW
 A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGTTTGCCCA-
TGACCTTTGCCCCA
 A C G T A C G T A C G T A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTGCCCA--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGTTTGCCCA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTTTGCCCA
--TTTTCCA-
 A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGTTTGCCCA--
---ATGCCAACC
 A T G C C T A G C G A T C G A T C G A T A C T G A G T C G A T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C