Information for 6-AGAACAGGAGGAG (Motif 13)

G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A C G T A T G C A G T C A C G T A C T G A C G T A G C T A G T C A C G T
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.2 +/- 19.6bp
Average Position of motif in Background43.2 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGAACAGGAGGAG
--AACAGGAAGT-
 G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAACAGGAGGAG-
--CACAGCAGGGGG
 G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAACAGGAGGAG-
GAGCACAGCAGGACA
 A C G T G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGAACAGGAGGAG
---ACAGGAAGTG
 G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G
A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAACAGGAGGAG-
CCACACAGCAGGAGA
 A C G T G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGAACAGGAGGAG
---ACAGGAAGTG
 G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGAACAGGAGGAG--
-----GGGAGGACNG
 G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAACAGGAGGAG---
-DCHCAGCAGGRGGCC
 G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGGAGGAG
CCAGGAACAG------
 A C G T A C G T A C G T G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAACAGGAGGAG-
CCACACAGCAGGAGA
 A C G T G T C A A C T G C T G A C G T A G T A C C G T A A C T G A T C G C G T A C T A G A C T G C G T A A C T G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A