Information for 3-CCACCCGGCRGCTCCC (Motif 11)

A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G A C T G C G T A T C A G A T G C G A C T T A C G A G T C A G T C C T A G A C T G A T C G A C G T A T C G C T A G
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.720
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif63.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets31.3 +/- 18.3bp
Average Position of motif in Background56.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCACCCGGCRGCTCCC
NCCCCCCCGGGGGGN---
 A C G T A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCACCCGGCRGCTCCC---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCACCCGGCRGCTCCC
CCCCCCCGGGGGNN---
 A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCACCCGGCRGCTCCC
AAATTCCCCCCGGAAGT----
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCACCCGGCRGCTCCC
ACCCCCCCGGGGGGN---
 A C G T A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCACCCGGCRGCTCCC-
--TGCCTGCGYCMCCTT
 A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCACCCGGCRGCTCCC
TGCCCCCGGGCA------
 A C G T A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCACCCGGCRGCTCCC
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCGGCRGCTCCC-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCACCCGGCRGCTCCC
-CCCCCTTGGGCCCC-
 A G T C A T G C T G C A A T G C A G T C A G T C C T A G A C T G A T G C C T G A A T C G A G T C G C A T A G T C A G T C A G T C
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T