Information for 1-AGAGGRGCAG (Motif 1)

T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G
Reverse Opposite:
G A T C G C A T A T C G A T G C A G C T T G A C G T A C C G A T A G T C A G C T
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.727
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif5.93%
Number of Background Sequences with motif933.3
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets53.8 +/- 29.3bp
Average Position of motif in Background50.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGRGCAG-
NTGATTGACAGN
 A C G T T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGRGCAG-
BTGABTGACAGS
 A C G T T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGGRGCAG-
AGGGTAACAGC
 T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGAGGRGCAG--
--GGGAGGACNG
 T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGRGCAG
GGAGGGGGAA
 T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGRGCAG-----
AGATGKDGAGATAAG
 T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGAGGRGCAG---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGAGGRGCAG--
TGAGTGACAGSC
 T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGAGGRGCAG--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAGGRGCAG-----
AGAGRRACAGCWGAC
 T C G A A C T G C G T A C A T G A C T G T C G A A T C G A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C