Information for 3-ATTTTTATTGCCT (Motif 6)

G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T
Reverse Opposite:
C G T A C T A G A C T G T G A C G T C A C G T A G C A T C G T A C T G A C G T A T C G A C T G A C G A T
p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.661
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif348.8
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets38.9 +/- 23.1bp
Average Position of motif in Background47.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTTATTGCCT-
TNAATTTTATTACCTN
 A C G T A C G T G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATTTTTATTGCCT
-NTTTTATTACN-
 G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTATTGCCT--
NAATTTTATTACCNNN
 A C G T G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Hoxd9/MA0913.1/Jaspar

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATTTTTATTGCCT
-TTTTTATTGC--
 G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ATTTTTATTGCCT
--TTTTATGGCTN
 G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTTATTGCCT-
NGANTTTTATGGCTCN
 A C G T A C G T G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTATTGCCT--
NAATTTTATTACCTNN
 A C G T G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATTTTTATTGCCT
-NTTTTATGAC--
 G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTATTGCCT-
NTNAATTTTATTGNATT
 A C G T A C G T A C G T G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ATTTTTATTGCCT
--TTTTATTGC--
 G C T A A G C T A G C T C G A T G A C T G C A T C G T A G C A T A C G T A C T G A G T C G A T C G A C T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T