Information for 3-GAGAAGGGAGCAAGGG (Motif 5)

A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G C T A C G T A T C G A G T C A C G T A G T C A T G C A G T C A G C T A C G T A G T C A G C T A G T C
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 26.3bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGAAGGGAGCAAGGG
GGAGAAAGGTGCGA---
 A C G T A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAGAAGGGAGCAAGGG
-----GGGAGGACNG-
 A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGAAGGGAGCAAGGG---
-GGAAGGAAGGAAGGAAGG
 A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGAAGGGAGCAAGGG
-----CGGAGC-----
 A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGAAGGGAGCAAGGG----
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAGAAGGGAGCAAGGG---
---NNAGGGACAAGGGCNC
 A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GAGAAGGGAGCAAGGG------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGAAGGGAGCAAGGG--
----GGGGCCCAAGGGGG
 A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GAGAAGGGAGCAAGGG
------AGAGGAAGTG
 A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAGAAGGGAGCAAGGG
NNNNGGGGGAAGANGG-
 A C G T A C T G C T G A C T A G G T C A C T G A A C T G A T C G A C T G C G T A A C T G A T G C G T C A C T G A A C T G A C T G A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T