Information for 7-AGGGCCAGGG (Motif 13)

C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G
Reverse Opposite:
G T A C T A G C T A G C C G A T T C A G A C T G T G A C G A T C A T G C A C G T
p-value:1e-9
log p-value:-2.227e+01
Information Content per bp:1.811
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif6.40%
Number of Background Sequences with motif920.3
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets49.8 +/- 27.9bp
Average Position of motif in Background50.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGGCCAGGG
CAAGGHCANV-
 A C G T C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCCAGGG---
CAGGCCNNGGCCNN
 A C G T C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCCAGGG---
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGGCCAGGG
-AGGCCTAG-
 C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGCCAGGG
CGTGCCAAG-
 C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGCCAGGG--
AGGTCAAGGTCA
 C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGGGCCAGGG---
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGGCCAGGG--
GGGGGCGGGGCC
 C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G A C G T A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGGCCAGGG---
TAGGGCAAAGGTCA
 A C G T C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGGGCCAGGG-
NANAAGGGCGTGGTC
 A C G T A C G T A C G T A C G T C G T A T A C G C T A G A C T G T G A C A G T C G C T A A T C G A T C G C A T G A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C