Information for 7-CCCTGGAGGGCGCTGG (Motif 12)

A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
Reverse Opposite:
T A G C G A T C T G C A T A C G A T G C C T A G T G A C T A G C T G A C A C G T A T G C A T G C C T G A C T A G A C T G A T C G
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.599
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.92%
Number of Background Sequences with motif1046.6
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets48.9 +/- 23.5bp
Average Position of motif in Background50.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGAGGGCGCTGG
ACCCCCCCGGGGGGN-----
 A C G T A C G T A C G T A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGAGGGCGCTGG
CACCCCCGGGGGGG-----
 A C G T A C G T A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGAGGGCGCTGG
NCCCCCCCGGGGGGN-----
 A C G T A C G T A C G T A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCTGGAGGGCGCTGG--
---AAGGKGRCGCAGGCA
 A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGAGGGCGCTGG
GTCCCCAGGGGA-------
 A C G T A C G T A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGAGGGCGCTGG
GCACCCCTGGGTGCC-----
 A C G T A C G T A C G T A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGAGGGCGCTGG
TGCCCNNAGGGCA----
 A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGAGGGCGCTGG
TGCCCTGAGGGCA----
 A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGAGGGCGCTGG
TGCCCTGAGGGCA----
 A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGAGGGCGCTGG
DCHCAGCAGGRGGCC--
 A C G T A T G C T A G C A G T C G A C T T A C G A T C G T G C A A C T G A T C G A C T G G A T C T A C G A T G C A C G T C A T G A T C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T