Information for 5-CCAAACAAMAYWT (Motif 6)

A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
Reverse Opposite:
G T C A G C T A C T A G A C G T A C T G A G C T A C G T A T C G A G C T A G C T A C G T C A T G A T C G
p-value:1e-17
log p-value:-4.001e+01
Information Content per bp:1.712
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.5 +/- 25.3bp
Average Position of motif in Background36.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CCAAACAAMAYWT
ATATCAAAACAAAACA-
 A C G T A C G T A C G T A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCAAACAAMAYWT-
AACAAACAACAAGAG
 A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACAAMAYWT
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACAAMAYWT-
TGCCAAAATAAACANN
 A C G T A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCAAACAAMAYWT
GCAAAACATTACTA
 A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACAAMAYWT
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACAAMAYWT
CAAAAGTAAACAAAG---
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCAAACAAMAYWT
CCAATCAA-----
 A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAAACAAMAYWT
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAAACAAMAYWT
TGTAAACAGGA---
 A C G T A T G C G T A C G T C A T C G A T C G A A T G C C G T A C T G A G T A C G T C A G A T C C G A T C A G T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T