Information for 23-AAGAACAAGAATA (Motif 35)

C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A
Reverse Opposite:
A G C T T C G A A G C T A C G T A T G C A C G T A C G T A C T G A C G T A G C T A G T C A G C T A C G T
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.826
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.5 +/- 23.6bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAGAACAAGAATA
AACAAACAACAAGAG--
 A C G T A C G T A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGAATA-
TTAAGAACAATAAATT
 A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGAACAAGAATA
NTTNAGAACAATTA--
 A C G T A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGAATA-
TTTAGAACAATAAAAT
 A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGAATA
CAAACAACAACACCT
 A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAGAACAAGAATA-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAGAACAAGAATA-
NNNTAACAATTATAN
 A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGAACAAGAATA
AAACAGACAAAGGAAT
 A C G T A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAGAACAAGAATA
AAATAAGAAAAAAC---
 A C G T A C G T A C G T A C G T C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AAGAACAAGAATA
-----NAACAAT-
 C G T A C T G A C T A G C T G A G T C A G T A C C G T A C G T A A T C G C G T A C T G A A C G T C T G A
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T